Early War Dazzle Camouflage
Of the various color and camouflage schemes, the most "visually interesting" is the early war Dazzle Camouflage which was applied primarily to Auxiliaries and merchant ships. Unfortunately there isn't a complete list identifying all the ships which had it. The US Navy Technical Team Report devoted a few pages to the theory behind Japanese Dazzle and provided some examples, but it was far from comprehensive.
The best single repository - one that is frequently cited by modelers - is
a web site featuring ship models created by the "merchant marine expert",
Motoyuki Iwashige (he's published at least one book on the subject). There are sub-pages containing almost 200 detailed models (most with photos), and it is a tremendous resource for anybody interested in the pictorial details of Japanese merchant shipping of this period.
In a few cases I was able to find evidence for additional ships with early war camo, and put the whole thing together in a spreadsheet that lists the names, ship types, AE classes, and links to evidence. As an example, the list below is just for AK-types:
Name Camo Type Camo Evidence AE Class AE Type # Ships Comment
Akagane Maru Dazzle Model Ansyu-C Cargo xAK 54
http://ww6.enjoy.ne.jp/~iwashige/akaganemaru.htm
Ayatosan Maru Bow Wave Photo/Model Yusen A Cargo xAK 7
http://ww6.enjoy.ne.jp/~iwashige/ayatosanmaru.htm
Brisbane Maru Dazzle Painting Kyushu Cargo xAK 32
http://ww6.enjoy.ne.jp/~iwashige/brisbanemaru.htm
Gyoku Maru Dazzle Photo/Model British xAK 0
http://ww6.enjoy.ne.jp/~iwashige/gyokumaru.htm
Gyoten Maru Dazzle Photo/Model British xAK 0
https://8320.teacup.com/delight/bbs
Hirokawa Maru Dazzle Photo/Model Yusen S Cargo AK 10
http://ww6.enjoy.ne.jp/~iwashige/hirokawamaru.htm
Kansai Maru Dazzle Photo/Model Kyushu Cargo xAK 32
http://ww6.enjoy.ne.jp/~iwashige/kansaimaru.htm
Kazuura Maru Dazzle Photo Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/kazuuramaru.htm
Keiyo Maru Dazzle Model Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/keiyomaru.htm
Kinka Maru German Radar Model Yusen S Cargo AK 10
http://ww6.enjoy.ne.jp/~iwashige/kinkamaru.htm
Kinugawa Maru Dazzle Photo/Model Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/kinugawamaru.htm
Kirishima Maru Bow Wave Photo/Model Kyushu Cargo xAK 32
http://ww6.enjoy.ne.jp/~iwashige/kirishimamaru.htm
Kiyozumi Maru Dazzle Photo/Model Ehime Cargo xAK 58
http://ww6.enjoy.ne.jp/~iwashige/kiyozumimaru.htm
Kyushu Maru Dazzle Photo/Model Yusen S Cargo AK 10
http://ww6.enjoy.ne.jp/~iwashige/kyushumaru.htm
Myoko Maru Dazzle Photo Kyushu Cargo xAK 32
https://en.wikipedia.org/wiki/SS_Myoko_Maru_(1939)
Nagara Maru Dazzle Photo/Model Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/nagaramaru.htm
Nako Maru Dazzle Model Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/nakomaru.htm
Oigawa Maru Dazzle Model Gozan Cargo xAK 61
http://ww6.enjoy.ne.jp/~iwashige/oigawamaru.htm
Sado Maru Dazzle Model Yusen S Cargo AK 10
http://ww6.enjoy.ne.jp/~iwashige/sadomaru.htm
Sagami Maru Dazzle Photo/Model Yusen S Cargo AK 10
http://ww6.enjoy.ne.jp/~iwashige/sagamimaru.htm
Sasako Maru Dazzle Painting Yusen S Cargo AK 10
http://ww6.enjoy.ne.jp/~iwashige/sasakomaru.htm
Shinai Maru ("Seikyo" in AE) Bow Wave Photo Ansyu-C Cargo xAK 54
https://www.flickr.com/photos/acstudio/6834602562
Suez Maru Dazzle Photo Daigen Cargo xAKL 68
http://www.powresearch.jp/en/archive/ship/suez.html
Taimei Maru ("Teimei" in AE) Bow Wave Photo/Model Ansyu-C Cargo xAK 54
http://ww6.enjoy.ne.jp/~iwashige/taimeimaru.htm
Yamabiko Maru Dazzle Photo Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/yamabikomaru.htm
Yamabiko Maru Dazzle Photo Yamabiko AR AR 1
http://ww6.enjoy.ne.jp/~iwashige/yamabikomaru.htm
Yamagiri Maru Dazzle Photo/Model Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/yamagirimaru.htm
Yamaura Maru Dazzle Photo/Model Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/yamauramaru.htm
Yamazuki Maru Dazzle Photo/Model Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/yamazukimaru.htm
Yasukawa Maru Dazzle Model Lima Cargo xAK 46
http://ww6.enjoy.ne.jp/~iwashige/yasukawamaru.htm
Zenyo Maru Dazzle Model Yusen N Cargo xAK 57
http://ww6.enjoy.ne.jp/~iwashige/zenyomaru.htm
The important thing to remember (and yes, I'm repeating myself), is that in most cases AE merchant ships and auxiliaries are grouped into multi-ship categories. So even when there is evidence that a particular ship had Dazzle (or other) Camouflage, we need to consider how the in-game implementation will affect all ships of that class.
Edit: Apologies for the data mish-mash. Apparently the BBS software ignores tabs.